Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs13184971 | chr5:81233027 | C/T | 5.59E-6 | 213 | 16.45 | 20.27 | 6.83 | KM Plot |
| KIRP | rs13185286 | chr5:81233231 | C/T | 5.04E-6 | 214 | 16.45 | 19.13 | 6.83 | KM Plot |
| KIRP | rs13185316 | chr5:176640340 | T/C | 5.72E-7 | 210 | 15.2 | 20.53 | 9.77 | KM Plot |
| KIRP | rs13185915 | chr5:79905411 | C/A | 8.66E-7 | 207 | 17.17 | 14.85 | 7.47 | KM Plot |
| KIRP | rs13190036 | chr5:176737720 | A/G | 1.21E-6 | 204 | 4.88 | 18 | 16.43 | KM Plot |
| KIRP | rs13191227 | chr6:27390115 | G/C | 1.71E-7 | 214 | 16.5 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13191786 | chr6:28277671 | T/G | 2.33E-7 | 213 | 16.45 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13192965 | chr6:27671825 | G/A | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13193295 | chr6:28003228 | C/G | 5.17E-7 | 211 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs13193480 | chr6:27702561 | A/G | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13193542 | chr6:27702425 | G/T | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13194781 | chr6:27815639 | A/G | 1.98E-7 | 214 | 16.47 | 12.8 | 9.77 | KM Plot |
| KIRP | rs13195291 | chr6:28169241 | G/A | 2.34E-7 | 212 | 16.43 | 15.02 | 9.77 | KM Plot |
| KIRP | rs13195401 | chr6:26463574 | G/T | 1.99E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs13195402 | chr6:26463575 | G/T | 1.99E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |